PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_1DL_AFDF3B024.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 525aa    MW: 58056.3 Da    PI: 6.3082
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_1DL_AFDF3B024.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.62.1e-11215243533
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                            k err+++NReAAr+sR+RKka++++Le+
  Traes_1DL_AFDF3B024.1 215 KTERRLAQNREAARKSRLRKKAYVQQLET 243
                            88*************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-6211277IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.5E-8213257No hitNo description
PROSITE profilePS502179.22213257IPR004827Basic-leucine zipper domain
PfamPF001709.6E-9215243IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.68E-7215256No hitNo description
PROSITE patternPS000360218233IPR004827Basic-leucine zipper domain
PfamPF141443.6E-27296370IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    Send to blast
MSRVLPLIAM LQQGEGESSW GMASDRGRAV PFGQALGYGI QGHAPPPANF LRELQPAAAA  60
YFGELEEALI HGTCAAGVDP VMIESDAHTK SAVAAAAGYL AARPPTLEIF PSWPMSHLQK  120
PYSGNSQSVG STDSSSAQNT MSQAELVSPV SMRTDSGQQQ QDQQEALMVT IDDYNYSQGL  180
GAAPATAPSF QQHAGAQDKR KHGSTRKDGK LVDPKTERRL AQNREAARKS RLRKKAYVQQ  240
LETGRIRLQQ IEQELQRGRS QGLLTGGCSA PGEMSSAAVM FDMEYARWLD EDNKYMAEIQ  300
GALQAQVLDA NLSTIVEDCM RHHDELFHLR AVLARSDVFH LMTGMWATQS ERCFLWMAGF  360
RPSEILKMLI PQLDPSTEQQ LLGMCNLQQS SEQAEEALEQ GLKQLHQSLA DAVGAGPLND  420
GADVANYTGL MALALDRLDN LESFYREADN LRQQTLHHMR RILTTRQTAR CFVSLGEYHR  480
RLRALSSIWA SRPRENFMMP ENVSSTATEF QAIHHQPQQN QFSGL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3701950.0AK370195.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2106J11.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014755260.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
RefseqXP_014755259.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
RefseqXP_014755258.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
RefseqXP_014755257.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
RefseqXP_014755256.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
RefseqXP_014755255.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
RefseqXP_003568348.20.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
SwissprotO241601e-109TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
SwissprotQ415581e-109HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLW5AHN30.0W5AHN3_WHEAT; Uncharacterized protein
STRINGMLOC_79223.30.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-125bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]